ILRI news

Lillian Wambua, a researcher in ILRI’s Biotechnology Theme, is one of the 2011 African Women in Agricultural Research and Development (AWARD) fellowship winners (photo credit: ILRI/Njiru).

The contribution of African women agricultural researchers and smallholder farmers to agricultural research and food production in the continent was last week highlighted and recognized during the announcement of the 2011 fellowships of the African Women in Agricultural Research and Development (AWARD), an initiative of the Gender and Diversity program of the Consultative Group on International Agricultural Research (CGIAR).

Seventy women agricultural scientists – including food and veterinary scientists and agricultural economists – from 11 countries across Africa will benefit from this year’s fellowships.  Among the winners of this year’s fellowships, which were announced at Jacaranda Hotel in Nairobi on Thursday 18 August, are two scientists affiliated with the International Livestock Research Institute (ILRI), Lillian Wambua and Nimmo Gicheru, who are researching some of the continent’s most pressing livestock disease problems.

Wambua, from the University of Nairobi, is a researcher in ILRI’s Biotechnology Theme, where she is investigating the impacts of bovine malignant catarrhal fever, a fatal livestock disease that is spread from wildebeest to cattle and harms the livelihoods of Maasai pastoralists in southern Kenya. ‘Livestock keepers need support to deal with these diseases,’ says Wambua. ‘I hope to help, particularly, women farmers to improve their productivity as they are the stronghold of the agricultural workforce in much of Africa. I believe this fellowship will raise my visibility and give me new skills to be a research leader in the process.’

ILRI’s Nimmo Gicheru, in light blue shirt, also received the 2011 AWARD fellowship (photo credit: ILRI/Njiru).

Nimmo Gicheru, who is currently pursuing her PhD studies, has a background in medical research and is part of an ILRI project working to enhance control of contagious bovine pleuropneumonia, a highly infectious livestock disease that occurs throughout much of sub-Saharan Africa. The project, which began in May 2011, seeks to develop diagnostic tools and vaccines to better manage the disease. ‘It’s a great honour to be selected as an AWARD Fellow, says Gicheru. ‘This program is showing us how to use various tools and techniques not only to apply our research but also to negotiate and network with other scientists in the process of sharing our innovations and knowledge with farmers,’ she said. ‘AWARD is giving African women agricultural scientists a voice.’

Speaking during the event, Vicki Wilde, director of the AWARD program, noted the ‘growing recognition of the importance of investing in Africa’s women.’ The program, now in its fourth year, has awarded fellowships to 250 African women scientists ‘who are coming out with strengthened science skills, gender responsiveness in their work and an increase in confidence and willingness to lead,’ said Wilde. ‘These fellows can play an influential role in Africa’s agricultural development by supporting African farmers with knowledge and innovation to enable them to bounce back in the face of dynamic change.’

‘AWARD is a shinning example of the contribution that women can make to food security and agricultural production in sub-Saharan Africa,’ said Kurt Low, office director for a Regional Economic Growth and Integration Program of United States Agency for International Development, which, together with the Bill and Melinda Gates Foundation, is a key sponsor of the program.

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For more information on the African Women in Agricultural Research and Development project and for a full list of the 2011 AWARD fellowship winners visit www.awardfellowships.org

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One of 7 high-tech laboratories at the Biosciences eastern and central Africa Hub, a regional state-of-the-art science platform hosted and managed by the International Livestock Research Institute (ILRI), in Nairobi, Kenya (photo credit: ILRI/David White).

Germany’s Chancellor Angela Merkel has arrived in Kenya.

Her busy one-day visit to this country, the first of three countries she is visiting on her African tour, includes talks with Kenya President Mwai Kibaki and Prime Minister Raila Odinga.

As reported in Kenya’s Daily Nation newspaper on Sunday, Merkel will also hold a joint press conference with Prime Minister Odinga. At the press conference, to be held at the Intercontinental Hotel, in Nairobi’s city centre, Chancellor Merkel will sign a new agreement between her government and the International Livestock Research Institute (ILRI), which is headquartered in Kenya.

ILRI Director General Carlos Seré and Director for Partnerships and Communications Bruce Scott will attend the prime minister’s press conference and take part in the signing ceremony. Chancellor Merkel and ILRI’s Carlos Seré will then attend a State luncheon hosted by President Kibaki at State House.

After the luncheon, Chancellor Merkel is scheduled to give a speech at the University of Nairobi. She will then pay a visit to ILRI’s headquarters, in the suburb of  Kabete, where she will tour ILRI’s farm and labs, be introduced to some of the research partnerships her country is involved in, and give an address to the ILRI and diplomatic community.

The Daily Nation reports that some of Germany’s scientists are working at ILRI, which is ‘described as a model of a state-of-the-art research institution in Africa.’

President Kibaki is quite familiar himself with ILRI’s research. The president toured the laboratories at ILRI/BecA late last year (17 Nov 2010) when he officially launched the BecA Hub. And just last Friday (8 Jul 2011), the president paid a visit to an ILRI exhibit at the launch of his government’s ‘Open Data Web Portal,’ the first of its kind in Africa, at the Kenyatta International Conference Centre. At this launch, the president and several of his ministers as well as some 1,000 (techie) participants heard from ILRI scientist Andrew Mude, who presented to them a novel livestock insurance product that ILRI has initiated with private and public partners for poor livestock herders living in Kenya’s northern pastoral lands.

After her busy day today in Nairobi, Chancellor Merkel departs tonight (Tue 12 Jul 2011) for  Angola before going on to Nigeria.

This is a red-letter day for ILRI for another reason. ILRI Director General Carlos Seré, an agricultural economist from Uruguay, and his wife, Chrysille Seré, from Germany, will also be departing Kenya tonight, as it is the director general’s last official day in his Nairobi office. Carlos Seré has led ILRI for ten years, having started his tenure in January 2002. He is going on summer leave starting tonight. On 1 October of this year, Jimmy Smith, an animal scientist and policymaker from Guyana, now at the World Bank, will take over from Carlos Seré as director general of ILRI.

ILRI has had several informal goodbye parties for the Seré’s and will have one more opportunity to wish him well in the new position he is taking up in Rome at the International Fund for Agricultural Research (IFAD) at a 1.5-day ‘Seré Seminar’ that will take place this November in Addis Ababa to look back at Seré’s 10-year ILRI legacy and forward to new leadership under Smith.

ILRI staff are thus expressing to themselves how kind it is for Chancellor Merkel and President Kibaki to bid their director general farewell in suitable style at the State and ILRI functions today. :-)

Read the whole article in the Daily Nation: German leader jets in Tuesday, 10 Jul 2011.

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Last known occurrences of rinderpest since 1995. IFPRI Discussion Paper 00923, November 2009, ‘The Global Effort to Eradicate Rinderpest’ by Peter Roeder and Karl Rich, 2020 Vision Initiative, a paper prepared for a project on Millions Fed: Proven Successes in Agricultural Development (www.ifpri.org/millionsfed) (illustration credit: FAO GREP).

Jeffrey Mariner, former advisor for special action areas to the Pan-African Rinderpest Campaign and current senior scientist at the International Livestock Research Institute (ILRI), based in Kenya, is one of several authors of a paper published in the current issue of Veterinary Record on the subject of the rising importance of building a systematic program to eradicate a goat disease known as ‘peste des petits ruminants’ (PPR), or goat plague.

The editorial in the Veterinary Record explains why goat plague is replacing cattle plague among the world’s verterinary researchers.

‘This week saw a landmark in the history of the veterinary profession and, more specifically, its management of disease threats to food security. The Food and Agriculture Organization of the United Nations (FAO) announced on June 28, 2011 that its member countries had passed a resolution declaring rinderpest to have been eradicated globally, building on an announcement in May that the World Organisation for Animal Health (OIE) at its General Session had passed a resolution to the effect that all countries in the world had been formally accredited as free from rinderpest.

‘These events mark the fact that the virus is no longer present in any of its natural hosts on this planet. No longer is it a cause of disease or a constraint to international trade. What is not generally appreciated is that the eradication of rinderpest has yielded benefits that surpass virtually every other development programme in agriculture, and will continue to do so into the future. For example, a preliminary study in Chad shows that over the period 1963 to 2002, each dollar spent on rinderpest eradication led to a benefit of at least US $16, a conservative estimate that only takes into account the benefits from reduced cattle deaths and resulting herd growth, without including secondary impacts on the economy as a whole (Rich and others 2011).

‘Building on the dramatic success of the global effort to eradicate rinderpest we now wish to draw attention to a related but significantly different morbillivirus disease, peste des petits ruminants (PPR), also known variously as goat plague, pseudorinderpest, pneumoenteritis and kata. A comprehensive review of the disease by research scientists at the Institute for Animal Health Pirbright laboratory (IAH Pirbright) is published in this issue of Veterinary Record and explains the scientific basis for considering eradication (Baron and others 2011).

‘Until relatively recently PPR was considered to be a parochial disease of west Africa; however, its range is now recognised to affect most of sub-Saharan Africa as well as a swathe of countries from Turkey through the Middle East to south Asia with recent alarming extensions into north Africa, central Asian countries and China. Capable of causing very high mortality in susceptible goat herds and sheep flocks, PPR exerts a major economic impact on farmers and their families dependent on small ruminants. There is a growing appreciation that PPR is a most serious constraint to the livelihoods of farming families and to food security in affected countries and that its control warrants significant investment. An additional concern is the lethal nature of PPR infection in wildlife species, many of which are endangered or threatened, including gazelles and mountain caprines. Until recently, losses were apparently restricted to extensive wildlife collections in the Middle East but now outbreaks are being recognised in free-ranging species such as the Sindh ibex (Capra aegagrus blythi) in Pakistan. It is probable that many cases of wildlife disease have passed unnoticed in remote locations.

‘Encouraged by what has been achieved with rinderpest and an understanding that the factors that marked rinderpest eradication as feasible apply equally to PPR, we believe that a global programme for the total eradication of PPR should be established as an international undertaking without delay. The FAO has recently hosted a number of symposia and workshops at which participating chief veterinary officers have unanimously requested such a global initiative against PPR. . . .’

Read the whole editorial in Veterinary Record: Rinderpest eradicated; what next?, 2011: 169. DOI:10-11 doi:10.1136/vr.d4011

Read a paper by Peter Roeder and ILRI scientist Karl Rich, The global effort to eradicate rinderpest, IFPRI Discussion Paper 00923, November 2009, prepared for the project on Millions Fed: Proven Successes in Agricultural Development.

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At the 79th General Session of the United Nations World Organisation for Animal Health (OIE), in Paris in May 2011, ILRI’s Jeff Mariner (second from right) stands among a group of distinguished people heading work responsible for the eradication of rinderpest, a status officially declared at this meeting (image credit: OIE).

Several world bodies are celebrating what is being described as ‘the greatest achievement in veterinary medicine’: the eradication of only the second disease from the face of the earth.

The disease is rinderpest, which means ‘cattle plague’ in German. It kills animals by a virus—and people by starving them through massive losses of their livestock.

‘In the nineteenth and twentieth centuries,’ reports the United Nations Food and Agriculture Organization (FAO), ‘the disease devastated parts of Africa, triggering extensive famines. . . . After decades of efforts to stamp out a disease that kept crossing national borders, countries and institutions agreed they needed to coordinate their efforts under a single, cohesive programme. In 1994, the Global Rinderpest Eradication Programme (GREP) was established at the UN Food and Agriculture Organization (FAO), in close association with the World Organization for Animal Health (OIE).

‘Excellent science, a massive vaccination effort, close international coordination and the commitment of people at all levels have helped make rinderpest eradication possible.

‘On June 28, 2011, FAO’s governing Conference will adopt a resolution officially declaring that rinderpest has been eradicated from animals worldwide. The successful fight against rinderpest underscores what can be achieved when communities, countries and institutions work together.’

Australian Peter Doherty, 1996 winner of the Nobel Prize for Medicine who served on the board of trustees of the International Laboratory for Research on Animal Diseases (ILRAD), a predecessor of  ILRI (photo credit: published on the Advance website).

Australian Peter Doherty, an immunologist who is the only veterinarian to win the Nobel Prize, for Physiology or Medicine, in 1996, and who served as chair of the board of trustees research program of the International Laboratory for Research on Animal Diseases (ILRAD), a predecessor of the International Livestock Research Institute (ILRI), is attending the FAO ceremonies this week. In an interview with FAO, he said:

Vaccine research is currently a very dynamic area of investigation and with sufficient investment and the enthusiastic participation of industry partners at the “downstream” end, we can achieve even better vaccines against many veterinary and human diseases.

The Washington Post in May reported that ‘the World Organization for Animal Health, at its annual meeting in Paris on Wednesday, accepted documentation from the last 14 countries that they were now free of rinderpest. The organization, which goes by its French acronym, OIE, was started in 1924 in response to a rinderpest importation in Europe.

‘The most recent recorded outbreak occurred in Kenya in 2001. Much of the past decade has been spent looking for new cases, in domesticated animals and in the wild, wandering herds of ungulates, or hoofed animals, in East Africa. The last place of especially intense surveillance was Somalia, where the final outbreak of smallpox occurred in 1977.

‘“There are a huge number of unsung heroes in lots of countries that made this possible,” said Michael Baron, a rinderpest virologist at the Institute for Animal Health in Surrey, England. “In most places, they were ordinary veterinary workers who were doing the vaccination, the surveillance, the teaching.”

‘Three things made rinderpest eradicable. Animals that survived infection became immune for life. A vaccine developed in the 1960s by Walter Plowright, an English scientist who died last year at 86, provided equally good immunity. And even though the virus could infect wild animals, it did not have a reservoir of host animals capable of carrying it for prolonged periods without becoming ill.

‘In 1994, the FAO launched an eradication program that was largely financed by European countries, although the United States, which never had rinderpest, also contributed money. The effort consisted of massive vaccination campaigns, which were made more practicable when two American researchers made a version of the Plowright vaccine that required no refrigeration. . . .’

One of those researchers was Jeffrey Mariner, now working at ILRI, in Nairobi, Kenya. Mariner also helped in surveillance work ‘with a technique called “participatory epidemiology” in which outside surveyors meet with herdsmen and ask open-ended questions about the health of their animals and when they last noticed certain symptoms.

‘“It was local knowledge that really helped us trace back the last places where transmission occurred—sitting down underneath a tree in the shade, listening to storytelling,” said Lubroth, of the FAO. . . .’

Read the whole article in the Washington Post, Rinderpest, or ‘cattle plague,’ becomes only second disease to be eradicated, 27 May 2011.

Read FAO’s interview of Peter Doherty: Healthier animals, healthier people, June 2011.

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This short (5-minute) film, ‘Battling a Killer Cattle Disease’, produced by the International Livestock Research Institute (ILRI), provides background and context for a recent research breakthrough made at ILRI’s animal health laboratories in Nairobi, Kenya, and at their partner institutions in the UK and Ireland. The research was funded over 7 years in large part by the Wellcome Trust in addition to the Consultative Group on International Agricultural Research (CGIAR).

Trypanosomosis is a wasting disease of livestock that maims and eventually kills millions of cattle in Africa and costs the continent billions of dollars annually.

In 2011, a group of geneticists at these collaborating institutions identified two genes that enable Africa’s ancient N’Dama cattle breed to resist development of the disease trypanosomosis when infected with the causative, trypanosome, parasite.

The team members were able to make use of the latest gene mapping and genomic technologies because they had the genetic systems and experimental populations of livestock in place to do so as these technologies came on stream.

Eventually, these results should make it easier for livestock breeders in Africa to breed animals that will remain healthy and productive in areas infested by the disease-carrying tsetse fly.

The international team that came together in this project is an example of the disciplinary breadth as well as agility needed to do frontline biology today. In this work, the team developed several new research approaches and technologies that were needed to unravel some fundamental biological issues, with likely benefits for many African farmers and herders.

Those interviewed in the film include Harry Noyes, at the University of Liverpool; Alan Archibald, at the Roslin Institute at the University of Edinburgh; Andy Brass, at the University of Manchester; and Steve Kemp and Morris Agaba, at ILRI.

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Watch ILRI’s new 4-minute photofilm, A tribute to the unsung heroes of small-scale food production.

A hitherto disregarded vast group of farmers—those who farm both crops and livestock—hold the key to feeding the world in coming years. Most of the world’s ‘mixed’ farmers are smallholders tending rice paddies or cultivating maize and beans while raising a few animals. A research report led by the International Livestock Research Institute (ILRI) indicates that this group is likely to play the biggest role in global food security over the next several decades (see ILRI Corporate Report 2009-2010, ‘Back to the Future: Revisiting mixed crop-livestock systems’). This photofilm celebrates these ‘unsung heroes’—both the mixed farmers themselves and their farm animals.

Some of our readers will remember that last year a perspective piece by ILRI was published in a special February 2010 issue of Science on food security, “Smart Investments in Sustainable Food Production: Revisiting Mixed Crop-Livestock Systems”, focused on the importance of the same smallholder mixed farmers.

This article was based on results of a study by the Systemwide Livestock Programme of the CGIAR Consortium.

Small farms that combine crop and livestock production supply much of the food staples (41 percent of maize, 86 percent of rice, and 74 percent of millet), as well as most of the meat and dairy products consumed in these countries.

The billions of dollars promised by the international donor community to fund small-scale agriculture farming are likely to fail unless policies are reoriented towards these ‘mixed’ farmers.

The pressures of climate change and finite resources, as well as the increasing demand for milk, meat and eggs across the developing world, will require proper planning, looking beyond ‘business as usual investments,’ and a greater ‘intellectual commitment’ to understanding food systems in the developing world.

Read more on this topic in ILRI’s Corporate Report 2009–2010: Back to the Future: Revisiting Mixed Crop-Livestock Systems, 2009.

Or visit the CGIAR Systemwide Livestock Programme website.

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Please find a corrected and revised statement below, along with a link to download revised maps here: http://ccafs.cgiar.org/resources/climate_hotspots. All edits to the original article posted on this blog are reflected in RED and BOLDFACE below.

Five per cent reduction in crop season sensitivity to change capacity to cope: Corrected 13 Jul 2011 (map credit ILRI/CCAFS/Notenbaert).

A new study out today reveals future ‘hotspots’ of risk for hundreds of millions whose food problems are on a collision course with climate change. The scientists conducting the study warn that disaster looms for parts of Africa and all of India if chronic food insecurity converges with crop-wilting weather. They went on to say that Latin America is also vulnerable.

The red areas in the map above are food-insecure and intensively farmed regions that are highly exposed to a potential five per cent or greater reduction in the length of the growing season. Such a change over the next 40 years could significantly affect food yields and food access for 369 million people—many of them smallholder farmers—already living on the edge. This category includes almost all of India and significant parts of West Africa. While Latin America in general is viewed as having a ‘high capacity’ to cope with such shifts, there are millions of poor people living in this region who very dependent on local crop production to meet their nutritional needs (map credit: ILRI-CCAFS/Notenbaert).

This study matches future climate change ‘hotspots’ with regions already suffering chronic food problems to identify highly-vulnerable populations, chiefly in Africa and South Asia, but potentially in China and Latin America as well, where in fewer than 40 years, the prospect of shorter, hotter or drier growing seasons could imperil hundreds of millions of already-impoverished people.

The report, Mapping Hotspots of Climate Change and Food Insecurity in the Global Tropics, was produced by the CGIAR Research Program on Climate Change, Agriculture and Food Security (CCAFS). The work was led by a team of scientists at the International Livestock Research Institute (ILRI) responding to an urgent need to focus climate change adaptation efforts on people and places where the potential for harsher growing conditions poses the gravest threat to food production and food security.

The researchers pinpointed areas of intense vulnerability by examining a variety of climate models and indicators of food problems to create a series of detailed maps. One shows regions around the world at risk of crossing certain ‘climate thresholds’—such as temperatures too hot for maize or beans—that over the next 40 years could diminish food production. Another shows regions that may be sensitive to such climate shifts because in general they have large areas of land devoted to crop and livestock production. And finally, scientists produced maps of regions with a long history of food insecurity.

ILRI scientist Polly Ericksen, lead author of the hotspots study (photo credit: ILRI/MacMillan).

‘When you put these maps together they reveal places around the world where the arrival of stressful growing conditions could be especially disastrous,’ said Polly Ericksen, a senior scientist at ILRI, in Nairobi, Kenya and the study’s lead author. ‘These are areas highly exposed to climate shifts, where survival is strongly linked to the fate of regional crop and livestock yields, and where chronic food problems indicate that farmers are already struggling and they lack the capacity to adapt to new weather patterns.’

‘This is a very troubling combination,’ she added.

For example, in large parts of South Asia, including almost all of India, and parts of sub-Saharan Africa—chiefly West Africa—there are 265 million food-insecure people living in agriculture-intensive areas that are highly exposed to a potential five per cent decrease in the length of the growing period. Such a change over the next 40 years could significantly affect food yields and food access for people—many of them farmers themselves—already living on the edge.

Higher temperatures also could exact a heavy toll. Today, there are 170 million food-insecure and crop-dependent people in parts of West Africa, India and China who live in areas where, by the mid-2050s, maximum daily temperatures during the growing season could exceed 30 degrees Celsius (86 degrees Fahrenheit). This is close to the maximum temperature that beans can tolerate, while maize and rice yields may suffer when temperatures exceed this level. For example, a study last year in Nature found that even with optimal amounts of rain, African maize yields could decline by one percent for each day spent above 30ºC.

Regional predictions for shifts in temperatures and precipitation going out to 2050 were developed by analyzing the outputs of climate models rooted in the extensive data amassed by the Fourth Assessment Report (AR4) from the United Nations Intergovernmental Panel on Climate Change (IPCC). Researchers identified populations as chronically food-insecure if more than 40 per cent of children under the age of five were ‘stunted’—that is, they fall well below the World Health Organization’s height-for-age standards.

CCAFS staff members Wiebke Foerch, based at ILRI, and Patti Kristjanson, based at the World Agroforestry Centre, hold discussions after ILRI’s Polly Ericksen presents her findings on poverty and climate change hotspots at the World Agroforestry Centre in May 2011 (photo credit: ILRI/MacMillan).

‘We are starting to see much more clearly where the effect of climate change on agriculture could intensify hunger and poverty, but only if we fail to pursue appropriate adaptation strategies,’ said Patti Kristjanson, a research theme leader at CCAFS and former agricultural economist at ILRI. ‘Farmers already adapt to variable weather patterns by changing their planting schedules or moving animals to different grazing areas. What this study suggests is that the speed of climate shifts and the magnitude of the changes required to adapt could be much greater. In some places, farmers might need to consider entirely new crops or new farming systems.’

Crop breeders at CGIAR centres around the world already are focused on developing so-called ‘climate ready’ crop varieties able to produce high yields in more stressful conditions. For some regions, however, that might not be a viable option—in parts of East and Southern Africa, for example, temperatures may become too hot to maintain maize as the staple crop, requiring a shift to other food crops, such as sorghum or cassava, to meet nutrition needs. In addition, farmers who now focus mainly on crop cultivation might need to integrate livestock and agroforestry as a way to maintain and increase food production.

Bruce Campbell, coordinator of the CGIAR program ‘Climate Change, Agriculture and Food Security (CCAFS)’, based in Copenhagen, talks with guests at a seminar given about CCAFS by Andy Jarvis at ILRI’s Nairobi campus on 13 May 2011 (photo credit: ILRI/MacMillan).

‘International trade in agriculture commodities is also likely to assume even more importance for all regions as climate change intensifies the existing limits of national agriculture systems to satisfy domestic food needs,’ said Bruce Campbell, director of CCAFS. ‘We have already seen with the food price spikes of 2008 and 2010 that food security is an international phenomenon and climate change is almost certainly going to intensify that interdependence.’

Ericksen and her colleagues note that regions of concern extend beyond those found to be most at risk. For example, in many parts of Latin America, food security is relatively stable at the moment—suggesting that a certain amount of ‘coping capacity’ could be available to deal with future climate stresses that affect agriculture production. Yet there is cause for concern because millions of people in the region are highly dependent on local agricultural production to meet their food needs and they are living in the very crosshairs of climate change.

The researchers found, for example, that by 2050, prime growing conditions are likely to drop below 120 days per season in intensively-farmed regions of northeast Brazil and Mexico.

Growing seasons of at least 120 days are considered critical not only for the maturation of maize and several other staple food crops, but also for vegetation crucial to feeding livestock.

In addition, parts of Latin America are likely to experience temperatures too hot for bean production, a major food staple in the region.

Mario Herrero, another ILRI author of the study, with climate Polly Ericksen and CCAFS staff member Wiebke Forech, all based at ILRI’s Nairobi headquarters, wait to hear a presentation from visiting CCAFS scientist Andy Jarvis at ILRI on 13 May 2011 (photo credit: ILRI/MacMillan).

The study also shows that some areas today have a ‘low sensitivity’ to the effects of climate change only because there is not a lot of land devoted to crop and livestock production. But agriculture intensification would render them more vulnerable, adding a wrinkle, for example, to the massive effort under way to rapidly expand crop cultivation in the so-called ‘bread-basket’ areas of sub-Saharan Africa.

Philip Thornton (white shirt, facing camera), of ILRI and CCAFS, and other ILRI staff following a seminar on CCAFS given by Andy Jarvis at ILRI Nairobi on 13 May 2011 (photo credit: ILRI/MacMillan).

‘Evidence suggests that these specific regions in the tropics may be severely affected by 2050 in terms of their crop production and livestock capacity. The window of opportunity to develop innovative solutions that can effectively overcome these challenges is limited,’ said Philip Thornton, a CCAFS research theme leader and ILRI scientist and one of the paper’s co-authors. ‘Major adaptation efforts are needed now if we are to avoid serious food security and livelihood problems later.’

Areas where average maximum temperatures are expected to exceed 30⁰C by 2050, corrected version (map credit: ILRI-CCAFS/Notenbaert).

Read the whole report: Mapping hotspots of climate change and food insecurity in the global tropics, by Polly Ericksen, Philip Thornton, An Notenbaert, L Cramer, Peter Jones and Mario Herrero 2011. CCAFS Report no. 5 (final version). CGIAR Research Program on Climate Change, Agriculture and Food Security (CCAFS). Copenhagen, Denmark. Also available online at: www.ccafs.cgiar.org.

Click here for the CCAFS online media room with more materials, including corrected versions of the news release in English, Spanish, French and Chinese, and also versions of the two maps shown here in high resolution suitable for print media.

All the maps will be made available online later this year; for more information on the maps, please contact ILRI’s Polly Ericksen at p.ericksen [at] cgiar.org or CCAFS’ Vanessa Meadu at ccafs.comms [at] gmail.com.

Note: This study was led by scientists at the International Livestock Research Institute (ILRI) for the CGIAR Research Program on Climate Change, Agriculture and Food Security (CCAFS). CCAFS is a strategic partnership of the CGIAR and the Earth System Science Partnership (ESSP). CCAFS brings together the world’s best researchers in agricultural science, development research, climate science and Earth System science, to identify and address the most important interactions, synergies and tradeoffs between climate change, agriculture and food security. The CGIAR’s Lead Centre for the program is the International Center for Tropical Agriculture (CIAT) in Cali, Colombia. For more information, visit www.ccafs.cgiar.org.

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Cow suffering from trypanosomiasis (photo credit: ILRI/Elsworth).

An international research team using a new combination of approaches has found two genes that may prove of vital importance to the lives and livelihoods of millions of farmers in a tsetse fly-plagued swathe of Africa the size of the United States. The team’s results were published today in the Proceedings of the National Academy of Sciences (PNAS).

The research, aimed at finding the biological keys to protection from a single-celled trypanosome parasite that causes both African sleeping sickness in people and a wasting disease in cattle, brought together a range of high-tech tools and field observations to address a critical affliction of some of the world’s poorest people.

With increased surveillance and control, sleeping sickness infections in people have dropped ten-fold in the last 13 years, from an estimated 300,000 cases a year in 1998 to some 30,000 in 2009, with the disease eventually killing more than half of those infected. Although best known for causing human sleeping sickness, the trypanosome parasite’s most devastating blow to human welfare comes in an animal form, with sick, unproductive cattle costing mixed crop-livestock farmers and livestock herders huge losses and opportunities. The annual economic impact of ‘nagana,’ a common name in Africa for the form of the disease that affects cattle (officially known as African animal trypanosomiasis), has been estimated at US$4–5 billion.

In a vast tsetse belt across Africa, stretching from Senegal on the west coast to Tanzania on the east coast, and from Chad in the north to Zimbabwe in the south, the disease each year renders millions of cattle too weak to plow land or to haul loads, and too sickly to give milk or to breed, before finally killing off most of those infected. This means that in much of Africa, where tractors and commercial fertilizers are scarce and prohibitively expensive, cattle are largely unavailable for tilling and fertilizing croplands or for producing milk and meat for families. The tsetse fly and the disease it transmits are thus responsible for millions of farmers having to till their croplands by hand rather than by animal-drawn plow.

‘The two genes discovered in this research could provide a way for cattle breeders to identify the animals that are best at resisting disease when infected with trypanosome parasites, which are transmitted to animals and people by the bite of infected tsetse flies,’ said senior author Steve Kemp, a geneticist on joint appointment with the Nairobi-based International Livestock Research Institute (ILRI) and the University of Liverpool.

This genetics of disease resistance research was led by scientists from ILRI in Africa and from the UK universities of Liverpool, Manchester and Edinburgh, and involved researchers from other institutions in Britain, Ireland and South Korea.

The researchers drew on the fact that while the humped cattle breeds characteristic of much of Africa are susceptible to disease-causing trypanosome parasites, a humpless West African breed, called the N’Dama, is not seriously affected by the disease. Having been domesticated in Africa some 8,000 or more years ago, this most ancient of African breeds has had time to evolve resistance to the parasites. This makes the N’Dama a valued animal in Africa’s endemic regions. On the other hand, N’Dama cattle tend to be smaller, to produce less milk, and to be less docile than their bigger, humped cousins.

African agriculturalists of all kinds would like to see the N’Dama’s inherent disease resistance transferred to these other more productive breeds, but this is difficult without precise knowledge of the genes responsible for disease resistance in the N’Dama. Finding these genes has been the ‘Holy Grail’ of a group of international livestock geneticists for more than two decades, but the genetic and other biological pathways that control bovine disease resistance are complex and have proven difficult to determine.

The PNAS paper is thus a landmark piece of research in this field. The international and inter-institutional team that made this breakthrough did so by combining a range of genetic approaches, which until now have largely been used separately.

‘This may be the first example of scientists bringing together different ways of getting to the bottom of the genetics of a very complex trait,’ said Kemp. ‘Combined, the data were like a Venn diagram overlaying different sets of evidence. It was the overlap that interested us.’

They used these genetic approaches to distinguish differences between the ‘trypano-tolerant’ (humpless) N’Dama, which come from West Africa, and ‘trypano-susceptible’ (humped) Boran cattle, which come from Kenya, in East Africa. The scientists first identified the broad regions of their genomes controlling their different responses to infection with trypanosome parasites, but this was insufficient to identify the specific genes controlling resistance to the disease. So the scientists began adding layers of information obtained from other approaches. They sequenced genes from these regions to look for differences in those sequences between the two breeds.

The team at Edinburgh conducted gene expression analyses to investigate any differences in genetic activity in the tissues of the two cattle breeds after sets of animals of both breeds were experimentally infected with the parasites. Then, the ILRI group tested selected genes in the lab. Finally, they looked at the genetics of cattle populations from all over Africa.

Analyzing the vast datasets created in this research presented significant computational challenges. Andy Brass and his team in the School of Computer Science at the University of Manchester managed to capture, integrate and analyze the highly complex set of biological data by using workflow software called ‘Taverna,’ which was developed as part of a UK e-Science initiative by Manchester computer scientist Carole Goble and her ‘myGrid’ team.

‘The Taverna workflows we developed are capable of analyzing huge amounts of biological data quickly and accurately,’ said Brass. ‘Taverna’s infrastructure enabled us to develop the systematic analysis pipelines we required and to rapidly evolve the analysis as new data came into the project. We’re sharing these workflows so they can be re-used by other researchers looking at different disease models. This breakthrough demonstrates the real-life benefits of computer science and how a problem costing many lives can be tackled using pioneering E-Science systems.’

To bolster the findings, population geneticists from ILRI and the University of Dublin examined bovine genetic sequences for clues about the history of the different breeds. Their evidence confirmed that the two genes identified by the ILRI-Liverpool-Manchester groups were likely to have evolved in response to the presence of trypanosome parasites.

‘We believe the reason the N’Dama do not fall sick when infected with trypanosome parasites is that these animals, unlike others, have evolved ways to control the infection without mounting a runaway immune response that ends up damaging them,’ said lead author Harry Noyes, of the University of Liverpool. ‘Many human infections trigger similarly self-destructive immune responses, and our observations may point to ways of reducing such damage in people as well as livestock.’

This paper, said Kemp, in addition to advancing our understanding of the cascade of genes that allow Africa’s N’Dama cattle to fight animal trypanosomiasis, reaffirms the importance of maintaining as many of Africa’s indigenous animal breeds (as well as plant/crop varieties) as possible. The N’Dama’s disease resistance to trypanosome parasites is an example of a genetic trait that, while not yet fully understood, is clearly of vital importance to the continent’s future food security. But the continued existence of the N’Dama, like that of other native ‘niche’ African livestock breeds, remains under threat.

With this new knowledge of the genes controlling resistance to trypanosomiasis in the N’Dama, breeders could screen African cattle to identify animals with relatively high levels of disease resistance and furthermore incorporate the genetic markers for disease resistance with markers for other important traits, such as high productivity and drought tolerance, for improved breeding programs generally.

If further research confirms the significance of these genes in disease resistance, a conventional breeding program could develop a small breeding herd of disease-resistant cattle in 10–15 years, which could then be used over the next several decades to populate Africa’s different regions with animals most suited to those regions. Using genetic engineering techniques to achieve the same disease-resistant breeding herd, an approach still in its early days, could perhaps be done in four or five years, Kemp said. Once again, it would be several decades before such disease-resistant animals could be made available to most smallholder farmers and herders on the continent.

‘So it’s time we got started,’ said Kemp.

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See this news and related background material at ILRI’s online press room.

The International Livestock Research Institute (www.ilri.org) works with partners worldwide to help poor people keep their farm animals alive and productive, increase and sustain their livestock and farm productivity, and find profitable markets for their animal products. ILRI’s headquarters are in Nairobi, Kenya; we have a principal campus in Addis Ababa, Ethiopia, and 13 offices in other regions of Africa and Asia. ILRI is part of the Consultative Group on International Agricultural Research (www.cgiar.org), which works to reduce hunger, poverty, illness and environmental degradation in developing countries by generating and sharing relevant agricultural knowledge, technologies and policies. This research is focused on development, conducted by a Consortium (http://consortium.cgiar.org) of 15 CGIAR centres working with hundreds of partners worldwide, and supported by a multi-donor Fund (www.cgiarfund.org).

The University of Liverpool (www.liv.ac.uk) is a member of the Russell Group of leading research-intensive institutions in the UK. It attracts collaborative and contract research commissions from a wide range of national and international organizations valued at more than £110 million annually.

The University of Manchester (www.manchester.ac.uk), also a member of the Russell Group, is the largest single-site university in the UK. It has 22 academic schools and hundreds of specialist research groups undertaking pioneering multi-disciplinary teaching and research of worldwide significance. According to the results of the 2008 Research Assessment Exercise, the University of Manchester is now one of the country’s major research universities, rated third in the UK in terms of ‘research power’. The university has an annual income of £684 million and attracted £253 million in external research funding in 2007/08.

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CGIAR Research Program 3.7 on livestock and fish: Opening slide in a series of 16 slides presented by ILRI director general Carlos Seré to the CGIAR Fund Council 6 April 2011 (credit: ILRI).

Carlos Pérez del Castillo, on behalf of the Consultative Group on International Agricultural Research (CGIAR) Consortium Board, which he chairs, wrote the following earlier this year in a cover letter to submission of a research proposal for consideration and approval by the CGIAR Fund Council.

‘The Consortium Board (CB) of the CGIAR has the pleasure to submit to the Fund Council (FC), for its consideration and approval, the CGIAR Research Program (CRP) 3.7, entitled “More Meat, Milk and Fish by and for the Poor.”

‘This proposal, submitted by ILRI (lead center), CIAT, ICARDA and WorldFish, focuses on improving productivity and profitability of meat, milk and fish for poor producers. This CRP constitutes a key link in the overall chain of impacts of the Strategy and Results Framework of the CGIAR. The CB considers that this research area, which has received relatively low attention from donors up to now, is of strategic importance for the livelihoods of the poor in developing countries. The challenge in this CRP is to set up market chains that fully address the special needs and circumstances of the poor smallholders and fishermen.

‘An additional challenge, fully in line with the spirit of the reform, is to create new research synergies by working on productivity improvement for livestock and fish in a more integrated manner than before the reform. The Board particularly appreciates the genuine integration of activities across the participating CGIAR centers that are proposed, and the overall quality of this proposal. We think that the proponents of this CRP have laid the ground for very innovative breakthroughs in research for development. . . .

‘The CB considers that the impact pathways described in the various log frames presented in the proposal are convincing. The identification of the eight target value chains is likewise a good mechanism for clearly focusing the work on addressing development challenges. The CB concurs with the referee who states that this is a very innovative dimension of the proposal, and a very effective one as well. ‘Concerning quality of science, the Board concurs with the referees that it is sound. The Board appreciates the explanation of the value addition of ILRI and WorldFish working alongside on genetic issues, as well as the description of the value chain development work. For the CGIAR, these are novel, and much needed, approaches.’

Read the full proposal: ILRI: CGIAR Research Program 3.7: More meat, milk and fish by and for the poor—Proposal  submitted to the CGIAR Consortium Board by ILRI on behalf of CIAT, ICARDA and the WorldFish Center, 5 March 2011.

CGIAR Research Program 3.7 on livestock and fish: First in a series of 16 slides presented by ILRI director general Carlos Seré to the CGIAR Fund Council 6 April 2011 (credit: ILRI).

View the whole slide presentation on this proposal made by ILRI director general Carlos Seré to the CGIAR Fund Council on 6 April 2011 in Montpellier, France.

More on the CRP and its development process

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Graphic showing pathways of livestock systems evolution to increase the sustainability of livestock production in selected systems, published in a paper by John McDermott et al, ‘Sustaining intensification of smallholder livestock systems in the tropics, Livestock Science (2010) (illustration credit: ILRI/McDermott).

John McDermott, who serves as deputy director general-research at the International Livestock Research Institute (ILRI), and some of his ILRI colleagues published a paper in Livestock Science that sets out what will be needed to make livestock production a sustainable system for smallholders in the developing world, enhancing both the livelihoods and environmental resources of the poor. The abstract of this ILRI paper follows.

‘Smallholder livestock keepers represent almost 20% of the world population and steward most of the agricultural land in the tropics. Observed and expected increases in future demand for livestock products in developing countries provide unique opportunities for improving livelihoods and linked to that, improving stewardship of the environment.

‘This cannot be a passive process and needs to be supported by enabling policies and pro-poor investments in institutional capacities and technologies. Sustaining intensification of smallholder livestock systems must take into account both social and environmental welfare and be targeted to sectors and areas of most probable positive social welfare returns and where natural resource conditions allow for intensification.

‘Smallholders are competitive in ruminant systems, particularly dairy, because of the availability of family labour and the ability of ruminants to exploit lower quality available roughage. Smallholders compete well in local markets which are important in agriculturally-based or transforming developing countries.

‘However, as production and marketing systems evolve, support to smallholders to provide efficient input services, links to output markets and risk mitigation measures will be important if they are to provide higher value products. Innovative public support and links to the private sector will be required for the poor to adapt and benefit as systems evolve. Likewise targeting is critical to choosing which systems with livestock can be intensified. Some intensive river basin systems have little scope for intensification. More extensive rain-fed systems, particularly in Africa, could intensify with enabling policies and appropriate investments. In more fragile environments, de-intensification is required to avoid irreversible damage to ecosystems.

‘Attention to both social and environmental sustainability are critical to understanding tradeoffs and incentives and to bridging important gaps in the perspectives on livestock production between rich and poor countries and peoples. Two specific examples in which important elements of sustainable intensification can be illustrated, smallholder dairy systems in East Africa and South Asia and small ruminant meat systems in Sub-Saharan Africa, are discussed.’

Read the whole paper, J.J. McDermott, S.J. Staal, H.A. Freeman, M. Herrero and J.A. Van de Steeg, Sustaining intensification of smallholder livestock systems in the tropics, published in Livestock Science, 2010: doi:10.1016/j.livsci.2010.02.014

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