Publications Archive

Genomic surveillance of Rift Valley fever virus

  • Juma, John
  • Fonseca, V.
  • Limbaso, K.
  • Heusden, P. van
  • Roesel, Kristina
  • Sang, R.
  • Bett, Bernard K.
  • Christoffels, A.
  • Oliveira, T. de
  • Oyola, Samuel O.

Whole-genome sequencing of SARS-CoV-2 reveals diverse mutations in circulating Alpha and Delta variants during the first, second and third waves of COVID-19 in South Kivu, east of the Democratic Republic of Congo

  • Ntagereka, P.B.
  • Oyola, Samuel O.
  • Baenyi, S.P.
  • Rono, Gilbert K.
  • Birindwa, A.B.
  • Shukuru, D.W.
  • Baharanyi, T.C.
  • Kashosi, T.M.
  • Buhendwa, J.C.
  • Bisimwa, P.B.
  • Kusinza, A.B.
  • Basengere, R.A.
  • Mukwege, D.

Imported SARS-CoV-2 variants of concern drove spread of infections across Kenya during the second year of the pandemic

  • Nasimiyu, C.
  • Matoke-Muhia, D.
  • Rono, Gilbert K.
  • Osoro, E.
  • Ouso, Daniel O.
  • Mwangi, J.M.
  • Mwikwabe, N.
  • Thiong’o, K.
  • Dawa, J.
  • Ngere, I.
  • Gachohi, J.
  • Kariuki, S.
  • Amukoye, E.
  • Mureithi, M.
  • Ngere, P.
  • Amoth, P.
  • Were, I.
  • Makayotto, L.
  • Nene, Vishvanath M.
  • Okoth, Edward A.
  • Njenga, M.K.
  • Seifert, S.N.
  • Oyola, Samuel O.

Identification and distribution of pathogens coinfecting with Brucella spp., Coxiella burnetii and Rift Valley fever virus in humans, livestock and wildlife

  • Middlebrook, E.A.
  • Romero, A.T.
  • Bett, Bernard K.
  • Nthiwa, Daniel
  • Oyola, Samuel O.
  • Fair, J.M.
  • Bartlow, A.W.

ILRI In-House reconstituted SARS-CoV-2 RT-qPCR testing kit as an alternative to the commercial kits

  • Mwangi, Reuben
  • Osiany, Shebbar
  • Kiritu, Edward
  • Dobi, Paul
  • Ouso, Daniel
  • Kibet, Gilbert
  • Njeru, Regina
  • Oyola, Samuel O.

Validation of ILRI in-house reconstituted kit for RT-qPCR diagnosis of SARS-CoV-2 virus

  • Mwangi, Reuben
  • Osiany, Shebbar
  • Kiritu, Edward
  • Dobi, Paul
  • Ouso, Daniel
  • Kibet, Gilbert
  • Njeru, Regina
  • Oyola, Samuel O.

Access to ultra-long IgG CDRH3 bovine antibody sequences using short read sequencing technology

  • Oyola, Samuel O.
  • Henson, Sonal P.
  • Nzau, B.
  • Kibwana, E.
  • Nene, Vishvanath M.

Profiling of RNA viruses in biting midges (Ceratopogonidae) and related Diptera from Kenya using metagenomics and metabarcoding analysis

  • Langat, S.K.
  • Eyase, F.
  • Bulimo, W.
  • Lutomiah, J.
  • Oyola, Samuel O.
  • Imbuga, M.
  • Sang, R.

Classification and phylogenetic typing of Rift Valley fever virus

  • Juma, John
  • Fonseca, V.
  • Konongoi, Samson L.
  • Oliveira, T. de
  • Christoffels, A.
  • Oyola, Samuel O.